Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827436.1_cds_XP_016503076.1_16652
CDS Infomation

[gene=LOC107821171] [db_xref=GeneID:107821171] [protein=reticuline oxidase-like] [protein_id=XP_016503076.1] [location=11604..13304] [gbkey=CDS]
Sequence

ATGAAACGAAATATATCCATGTCTCTTCAGCGTTTGCTCATAATTCTGATGATGATCAGC
TTCTTATTTACTTCTCTTCTTGTACCTTCCGTCTCTGCTACAAATCTCAATACCATTTCC
ACCTGTTTGATCAATTACAAAGTCAGTAACTTCTCTGTTTATCCAACAAGGAATCATGCT
GGTAATAGGTACTATAACTTGCTTGATTTCTCCATTCAGAATCTCCGATTCGCAGCGTCC
TCTAAACCAAAACCAACGGTCATTATCGTACCAGAGAGCAAGGAGCAGCTGGTGAGCAGC
GTTCTGTGTTGCAGACAAGGTTCTTATGAAATCAGAGTAAGGTGCGGAGGACACAGTTAT
GAAGGGACTTCTTACGTTTCCTTTGATGGTTCCCCATTTGTGGTCATTGATTTGATGAAA
TTAGATGATGTTTCGGTAGATTTGGATTCCGAAACCGCGTGGGTACAAGGTGGCGCTACA
CTTGGCCAGACTTATTATGCCATTTCCCGGGCCAGTGACGTTCATGGATTTTCAGCTGGT
TCTTGCCCAACAGTTGGGGTTGGGGGCCACATTTCCGGGGGTGGCTTTGGATTTTTATCA
AGAAAATATGGACTTGCTGCTGATAACGTGGTGGATGCTCTTCTTGTTGATGCGGAAGGA
CGGCTATTAGACCGCAAAGCCATGGGAGAAGAAGTGTTTTGGGCCATCAGAGGTGGTGGT
GGAGGAATTTGGGGAATCATTTACGCCTGGAAAATCCGATTGCTCAAAGTGCCCAAGACT
GTGACTAGTTTCATAGTCCCTAGGCCTGGCTCCAAACGATATGTGTCCCAACTAGTTCAC
AAATGGCAACTTGTTGCACCAAAGTTAGACGATGACTTTTATCTATCGATCTCCATGAGC
TCTGCTAGTAAAGGAAACATTCCTATTGAAATAAATGCCCAATTCAGCGGATTTTACCTA
GGTACAAAAACCGAAGCCATTTCCATCTTGAATGAGGCCTTTCCGGAGTTGGGAGTTGTG
GAAAGTGACTGCAAAGAAATGAGTTGGATTGAATCAACACTTTTCTTCTCCGAATTAGAT
AACGTTGCGAACACCTCCGATGTCTCTCGTTTGAAAGAGCGTTACTTTGAAAACAAATCA
TACTTCAAAGCCAAATCAGACCATGTGAAGACCCCAATTTCAGTGGGAGGGATTATGACA
GCTCTTGATGTTCTTGAGAAAGAACCAAATGGACATGTCATCTTTGACCCTTATGGTGCA
GCCATGCAGAGAATTAGCGAGGAAGCTATTGCTTTCCCTCATAGAAAGGGTAACCTATTC
AGAATTCAATATCTAGTAGTGTGGAAAGAAAAGGACAATAATAATATTGCCAAGAGCAAT
GGGTACATAGAGTGGATAAGAGAGTTTTACAATACAATGGCACCCCATGTTTCTAGTTCA
CCTAGGGCAGCTTATGTCAACTATATGGATCTGGACCTTGGAGTGATGGACGACTACTTA
ATGCTAAATACTAGTATTACTGCCTCTGCTGATCATGCCGTGGAGAGAGCAAGGGTCTGG
GGTGAAAAGTATTTCTTGAATAACTATGATAGATTGGTCAAAGCTAAGACAAAAATTGAC
CCACTAAACGTTTTTCGACATCAACAGGGCATCCCTCCTATGTTCGCCTCAATGCCAGAG
CATACCTATAGTAGTAAATGA

Peptide Sequence

PEP ID

XP_016503076.1
PEP Infomation

PREDICTED: reticuline oxidase-like [Nicotiana tabacum]
Sequence

MKRNISMSLQRLLIILMMISFLFTSLLVPSVSATNLNTISTCLINYKVSNFSVYPTRNHA
GNRYYNLLDFSIQNLRFAASSKPKPTVIIVPESKEQLVSSVLCCRQGSYEIRVRCGGHSY
EGTSYVSFDGSPFVVIDLMKLDDVSVDLDSETAWVQGGATLGQTYYAISRASDVHGFSAG
SCPTVGVGGHISGGGFGFLSRKYGLAADNVVDALLVDAEGRLLDRKAMGEEVFWAIRGGG
GGIWGIIYAWKIRLLKVPKTVTSFIVPRPGSKRYVSQLVHKWQLVAPKLDDDFYLSISMS
SASKGNIPIEINAQFSGFYLGTKTEAISILNEAFPELGVVESDCKEMSWIESTLFFSELD
NVANTSDVSRLKERYFENKSYFKAKSDHVKTPISVGGIMTALDVLEKEPNGHVIFDPYGA
AMQRISEEAIAFPHRKGNLFRIQYLVVWKEKDNNNIAKSNGYIEWIREFYNTMAPHVSSS
PRAAYVNYMDLDLGVMDDYLMLNTSITASADHAVERARVWGEKYFLNNYDRLVKAKTKID
PLNVFRHQQGIPPMFASMPEHTYSSK

Transcript Sequence

Gene sequence data has not been registered.